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Next generation sequencing yields the complete mitochondrial genome of the Endangered Chilean silverside Basilichthys icrolepidotus (Jenyns, 1841) (Teleostei, Atherinopsidae), validated with RNA-seq

  • Universidad de Chile

Research output: Contribution to journalArticlepeer-review

1 Scopus citations

Abstract

The complete sequence of the mitochondrial genome for the Chilean silverside Basilichthys microlepidotus is reported for the first time. The entire mitochondrial genome was 16,544 bp in length (GenBank accession no. KM245937); gene composition and arrangement was conformed to that reported for most fishes and contained the typical structure of 2 rRNAs, 13 proteincoding genes, 22 tRNAs and a non-coding region. The assembled mitogenome was validated against sequences of COI and Control Region previously sequenced in our lab, functional genes from RNA-Seq data for the same species and the mitogenome of two other atherinopsid species available in Genbank.

Original languageEnglish
Pages (from-to)1505-1506
Number of pages2
JournalMitochondrial DNA
Volume27
Issue number2
DOIs
StatePublished - 2016
Externally publishedYes

Keywords

  • Freshwater fish
  • Mitogenome
  • NGS
  • RNA-Seq

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